Report for Model 19

— for both jointly and separately

2024-11-10

1. Joint Modeling

1.1 Trace plots for convergence check

The current MCMC setting is:

  • 4000000 iteration;
  • 3000000 burn-in;
  • 1000 thinning.

1.2 Gelman and Rubin’s convergence check

## Potential scale reduction factors:
## 
##         Point est. Upper C.I.
## HDevsum      1.001      1.006
## LDevsum      0.999      0.999
## dh0          1.002      1.011
## dl0          1.005      1.006
## dl1          1.000      1.004
## dl2          0.999      1.000
## dl3          1.000      1.003
## 
## Multivariate psrf
## 
## 1

1.3 ACF Plots

Here we plotted ACF plots for the following variables:

  • Total deviance;
  • Variables that didn’t pass the convergence check.

1.4 WAIC results

LevelH LevelL
DIC 1358.44190 24731.751
DIC3 1238.42518 21023.763
PWAIC 80.44013 1266.063
WAIC 1296.83208 21589.610

2. Separate Modeling of High-Level

2.1 Trace plots for convergence check

The current MCMC setting is:

  • 4000000 iteration;
  • 3000000 burn-in;
  • 1000 thinning.

2.2 Gelman and Rubin’s convergence check

## Potential scale reduction factors:
## 
##         Point est. Upper C.I.
## HDevsum       1.00       1.02
## dh0           1.01       1.03
## 
## Multivariate psrf
## 
## 1.01

2.3 ACF Plots

Here we plotted ACF plots for the following variables:

  • Total deviance;
  • Variables that didn’t pass the convergence check.

2.4 WAIC results

H0b
DIC 1396.91005
DIC3 1260.67413
PWAIC 94.92954
WAIC 1333.02177

3. Separate Modeling for Low-level

3.1 Trace plots for convergence check

The current MCMC setting is:

  • 4000000 iteration;
  • 3000000 burn-in;
  • 1000 thinning.

3.2 Gelman and Rubin’s convergence check

## Potential scale reduction factors:
## 
##         Point est. Upper C.I.
## LDevsum      0.999      0.999
## dl0          1.031      1.139
## dl1          1.002      1.012
## dl2          1.017      1.081
## dl3          0.999      0.999
## 
## Multivariate psrf
## 
## 1.03

3.3 ACF Plots

Here we plotted ACF plots for the following variables:

  • Total deviance;
  • Variables that didn’t pass the convergence check.

3.4 WAIC results

L7
DIC 24158.821
DIC3 20960.738
PWAIC 1182.775
WAIC 21473.510